Radiation-Associated Sarcomas (MSK, 2023)
Overview
The sarcoma_msk_2023 dataset is a Memorial Sloan Kettering Cancer Center (MSK) cohort of 82 radiation-associated (RT) sarcoma patients spanning four histotypes: angiosarcoma, malignant peripheral nerve sheath tumor, undifferentiated pleomorphic sarcoma, and osteosarcoma. The study compared the genomic landscapes of RT-sarcomas with matched sporadic sarcoma controls (548 total sporadic cases) PMID:37350195.
Composition
- 44 RT-ANGS (38 from breast/chest wall) PMID:37350195.
- 12 RT-MPNST PMID:37350195.
- 14 RT-MFH (UPS) PMID:37350195.
- 12 RT-OS PMID:37350195.
- Control groups: 135 sporadic AS, 64 sporadic MPNST, 273 sporadic UPS, 76 sporadic OS PMID:37350195.
- Demographics: 68 (83%) female, 14 (17%) male, age 37-88 years (mean 64) PMID:37350195.
- Reference genome: GRCh37 (hg19) PMID:37350195.
Assays / panels (linked)
- MSK-IMPACT targeted DNA next-generation sequencing panel PMID:37350195.
Papers using this cohort
- PMID:37350195 — Dermawan JK et al., “Distinct genomic landscapes in radiation-associated angiosarcoma compared with other radiation-associated sarcoma histologies,” J Pathol 2023.
Notable findings derived from this cohort
- RT-AS has a genomically distinct landscape from other RT-sarcoma histotypes, dominated by MYC amplification (75%), while other RT-sarcomas are driven by TP53 and CDKN2A/CDKN2B loss PMID:37350195.
- RT-MPNST showed the highest FGA (51%) and near-universal CDKN2A/B deletions (92%) PMID:37350195.
- Each RT-sarcoma histotype harbored distinct mutations and copy number alterations, supporting histotype-specific therapeutic approaches PMID:37350195.
- MYC-amplified RT-AS had significantly shorter latency from radiation to sarcoma diagnosis than non-MYC-amplified cases (P = 0.0083) PMID:37350195.
- Predominant mutational signatures across all four RT-sarcoma histotypes were associated with errors in DNA repair and replication PMID:37350195.
Sources
- PMID:37350195 — Dermawan JK et al., J Pathol 2023.
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