SFPQ

Overview

SFPQ (Splicing Factor Proline and Glutamine Rich) is an RNA-binding protein involved in transcriptional regulation and RNA processing. In clear cell renal cell carcinoma (ccRCC), SFPQ is a recurrent fusion partner of TFE3, forming in-frame fusions that are exclusively identified in VHL wildtype tumors and are associated with X(p11) translocations.

Alterations observed in the corpus

  • Recurrent in-frame fusion with TFE3 (SFPQ–TFE3); identified in 5 samples; all VHL wildtype; often accompanied by X(p11) translocation confirmed by FISH. PMID:23792563

Cancer types (linked)

  • CCRCC: SFPQ–TFE3 fusions define a VHL-wildtype subset of ccRCC, representing a molecularly distinct subgroup. PMID:23792563

Co-occurrence and mutual exclusivity

  • SFPQ–TFE3 fusions occur exclusively in VHL wildtype ccRCC tumors, suggesting mutual exclusivity with VHL mutation. PMID:23792563

Therapeutic relevance

  • No specific therapeutic implication reported in this study; the SFPQ–TFE3 fusion subset may represent a distinct molecular entity warranting separate clinical consideration. PMID:23792563

Open questions

  • Functional consequences of the SFPQ–TFE3 fusion in driving ccRCC in the VHL-wildtype background are not characterized in this study. PMID:23792563

Sources

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